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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs11364536 chr1:210979973 GT/G C18orf26 chr18:52254988-52266724:+ -0.76 -9.21 1.65E-12 Box Plot
ACC rs113681484 chr3:37651591 G/A OR5V1 chr6:29323007-29399744:- 0.63 9.48 6.27E-13 Box Plot
ACC rs11375211 chr2:142849909 A/ATT PRHOXNB chr13:28552243-28562774:- 0.57 7.64 4.79E-10 Box Plot
ACC rs113959482 chr13:105320746 A/G PRHOXNB chr13:28552243-28562774:- 0.72 7.77 2.99E-10 Box Plot
ACC rs113973714 chr2:234248547 G/A PRAMEF6 chr1:12998302-13007406:- 0.67 7.94 1.61E-10 Box Plot
ACC rs11413089 chr17:32522250 A/AT TFDP3 chrX:132350697-132352376:- 0.99 8.59 1.52E-11 Box Plot
ACC rs114177439 chr2:142872352 T/A PRHOXNB chr13:28552243-28562774:- 0.57 7.65 4.54E-10 Box Plot
ACC rs114249635 chr2:142866949 G/A PRHOXNB chr13:28552243-28562774:- 0.57 7.64 4.79E-10 Box Plot
ACC rs114329538 chr3:128558387 G/A OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs11435688 chr1:151954033 T/TC EPGN chr4:75174190-75181024:+ -0.87 -8.17 6.79E-11 Box Plot
ACC rs114376554 chr2:142859391 C/T PRHOXNB chr13:28552243-28562774:- 0.57 7.64 4.79E-10 Box Plot
ACC rs1144328 chr1:76266601 G/A OR6C3 chr12:55725485-55726420:+ -0.93 -8.53 1.89E-11 Box Plot
ACC rs114434474 chr1:119663550 C/T PRHOXNB chr13:28552243-28562774:- 0.63 9.24 1.46E-12 Box Plot
ACC rs114441742 chr3:128547271 C/T OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs114544572 chr1:119589463 T/G PRHOXNB chr13:28552243-28562774:- 0.64 8.82 6.58E-12 Box Plot